STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BRZ8_THAPSPH domain-containing protein. (913 aa)    
Predicted Functional Partners:
B8LE83_THAPS
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.976
B8BYE2_THAPS
Uncharacterized protein.
   
 
 0.918
atpB
ATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 0.862
THAPS_41256
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.862
B8LET6_THAPS
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.862
B8C1H9_THAPS
Serine/threonine-protein kinase PLK.
   
 0.848
B8BSR4_THAPS
Peptidase C50 domain-containing protein.
   
 
 0.771
B8C7T7_THAPS
HORMA domain-containing protein.
   
 
 0.745
B8C1F5_THAPS
Kinesin motor subunit-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.741
B8BW45_THAPS
WD_REPEATS_REGION domain-containing protein.
   
 
 0.733
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
Server load: low (16%) [HD]