Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B8BRG6_THAPS | B8BS24_THAPS | B8BRG6 | B8BS24 | SANT_DAMP1_like domain-containing protein. | Histone H2A; Belongs to the histone H2A family. | 0.931 |
B8BRG6_THAPS | B8BXC5_THAPS | B8BRG6 | B8BXC5 | SANT_DAMP1_like domain-containing protein. | DUF2236 domain-containing protein. | 0.502 |
B8BRG6_THAPS | B8CAJ4_THAPS | B8BRG6 | B8CAJ4 | SANT_DAMP1_like domain-containing protein. | RuvB-like helicase; Belongs to the RuvB family. | 0.995 |
B8BRG6_THAPS | B8CC53_THAPS | B8BRG6 | B8CC53 | SANT_DAMP1_like domain-containing protein. | Histone H3; Belongs to the histone H3 family. | 0.502 |
B8BRG6_THAPS | H3 | B8BRG6 | B8BTC1 | SANT_DAMP1_like domain-containing protein. | Histone H3. | 0.502 |
B8BRG6_THAPS | H3-2 | B8BRG6 | B5YMD6 | SANT_DAMP1_like domain-containing protein. | Histone H3; Belongs to the histone H3 family. | 0.502 |
B8BRG6_THAPS | H4_2 | B8BRG6 | B5YMD7 | SANT_DAMP1_like domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.787 |
B8BRG6_THAPS | THAPSDRAFT_887 | B8BRG6 | B8BSQ7 | SANT_DAMP1_like domain-containing protein. | Uncharacterized protein. | 0.555 |
B8BS24_THAPS | B8BRG6_THAPS | B8BS24 | B8BRG6 | Histone H2A; Belongs to the histone H2A family. | SANT_DAMP1_like domain-containing protein. | 0.931 |
B8BS24_THAPS | B8BXC5_THAPS | B8BS24 | B8BXC5 | Histone H2A; Belongs to the histone H2A family. | DUF2236 domain-containing protein. | 0.915 |
B8BS24_THAPS | B8C9G8_THAPS | B8BS24 | B8C9G8 | Histone H2A; Belongs to the histone H2A family. | TAFII55_N domain-containing protein. | 0.408 |
B8BS24_THAPS | B8CAJ4_THAPS | B8BS24 | B8CAJ4 | Histone H2A; Belongs to the histone H2A family. | RuvB-like helicase; Belongs to the RuvB family. | 0.964 |
B8BS24_THAPS | B8CC53_THAPS | B8BS24 | B8CC53 | Histone H2A; Belongs to the histone H2A family. | Histone H3; Belongs to the histone H3 family. | 0.918 |
B8BS24_THAPS | H3 | B8BS24 | B8BTC1 | Histone H2A; Belongs to the histone H2A family. | Histone H3. | 0.916 |
B8BS24_THAPS | H3-2 | B8BS24 | B5YMD6 | Histone H2A; Belongs to the histone H2A family. | Histone H3; Belongs to the histone H3 family. | 0.919 |
B8BS24_THAPS | H4_2 | B8BS24 | B5YMD7 | Histone H2A; Belongs to the histone H2A family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.999 |
B8BS24_THAPS | THAPSDRAFT_887 | B8BS24 | B8BSQ7 | Histone H2A; Belongs to the histone H2A family. | Uncharacterized protein. | 0.518 |
B8BXC5_THAPS | B8BRG6_THAPS | B8BXC5 | B8BRG6 | DUF2236 domain-containing protein. | SANT_DAMP1_like domain-containing protein. | 0.502 |
B8BXC5_THAPS | B8BS24_THAPS | B8BXC5 | B8BS24 | DUF2236 domain-containing protein. | Histone H2A; Belongs to the histone H2A family. | 0.915 |
B8BXC5_THAPS | B8CAJ4_THAPS | B8BXC5 | B8CAJ4 | DUF2236 domain-containing protein. | RuvB-like helicase; Belongs to the RuvB family. | 0.782 |
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