STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BU58_THAPSPeptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. (109 aa)    
Predicted Functional Partners:
PMSR1
Peptide methionine sulfoxide reductase.
 
 
 0.694
B8BQ68_THAPS
PMSR domain-containing protein.
 
 
 0.693
B8BTD9_THAPS
Peptide methionine sulfoxide reductase.
 
 
 0.692
MSA1
Probable peptide methionine sulfoxide reductase.
 
 
 0.680
TMS1
Possible thymidylate synthase.
     
 0.591
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.562
RL20
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.562
B8CCL3_THAPS
Phosphoadenosine-phosphosulphate reductase.
   
 0.559
B8BXT4_THAPS
Uncharacterized protein.
    
 
 0.536
B8C176_THAPS
Thioredoxin domain-containing protein.
  
  
 0.528
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.