STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BUZ9_THAPSCdc2/cdc28 protein kinase; Belongs to the protein kinase superfamily. (291 aa)    
Predicted Functional Partners:
B8BX23_THAPS
Cyclin N-terminal domain-containing protein.
    
 0.999
B8C8A6_THAPS
Uncharacterized protein.
   
 0.999
ERCC2
Nucleotide excision repair protein ERCC2.
    
 0.998
B8LCE0_THAPS
Predicted protein.
   
 0.998
B8BXI5_THAPS
BSD domain-containing protein.
   
 0.996
B8C051_THAPS
C2H2-type domain-containing protein.
   
 0.996
B8C0Y9_THAPS
Uncharacterized protein.
    
 0.995
B8BQW1_THAPS
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.993
RP3A
RP3A,-like protein to dna-directed RNA polymerase II third largest subunit.
   
 0.973
B8CEQ0_THAPS
TFIIB-type domain-containing protein.
   
 0.968
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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