STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BV96_THAPSA to I editase domain-containing protein. (1766 aa)    
Predicted Functional Partners:
B8BY49_THAPS
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.753
B8C2T3_THAPS
SAM_MT_TRM5_TYW2 domain-containing protein.
   
  
 0.602
B8BUJ2_THAPS
Uncharacterized protein.
      
 0.495
B8C627_THAPS
Sulfhydryl oxidase.
   
  
 0.486
ANS1
Asparagine synthase.
   
  
 0.482
B8C6S7_THAPS
SAM-dependent MTase TRM10-type domain-containing protein.
      
 0.481
B8C089_THAPS
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
    
 
 0.474
B8CD03_THAPS
Adenosine deaminase.
   
  
 0.472
THAPS_23371
Predicted protein.
      
 0.471
apc10
Anaphase promoting complex subunit 10.
      
 0.471
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.