STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BVF6_THAPSArfGAP. (259 aa)    
Predicted Functional Partners:
B8BQB2_THAPS
Arf-GAP domain-containing protein.
   
0.933
B8BTR3_THAPS
ArfGAP.
   
0.933
THAPS_7208
Rab-type small GTPase.
    
 
 0.883
B8C878_THAPS
Exocyst subunit Exo70 family protein; Component of the exocyst complex.
   
 
 0.768
B8C0T2_THAPS
Brix domain-containing protein.
 
      0.766
B8C531_THAPS
Uncharacterized protein.
   
 0.662
THAPS_23528
Rab-type small GTPase.
    
 0.659
B8LC09_THAPS
Predicted protein.
    
 0.659
B8BR17_THAPS
Sec5 domain-containing protein.
   
 
  0.655
B8C187_THAPS
Uncharacterized protein.
   
 
  0.655
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.