STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BVV4_THAPSUncharacterized protein. (419 aa)    
Predicted Functional Partners:
B8BSV8_THAPS
Tubulin-specific chaperone d.
  
  
 0.613
B8C6L5_THAPS
Cytochrome c domain-containing protein.
 
      0.540
ChlH1
Chelatase of mg-protoporphyrin IX chelatase.
 
  
 0.538
B8C067_THAPS
Uncharacterized protein.
  
   
 0.524
B8CDB3_THAPS
FAD_binding_3 domain-containing protein.
  
  
 0.477
B8BW15_THAPS
Uncharacterized protein.
 
   
 0.452
B8C2L0_THAPS
DUF3479 domain-containing protein.
 
  
 0.441
THAPSDRAFT_735
NADH dehydrogenase.
     
 0.424
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.