STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BWW0_THAPSUncharacterized protein. (977 aa)    
Predicted Functional Partners:
B8BQQ4_THAPS
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
  
 0.999
CAP1
Structural maintenance of chromosomes protein.
   
 0.999
B8BQW8_THAPS
Cnd3 domain-containing protein.
   
 0.999
B8CCA2_THAPS
Structural maintenance of chromosomes protein.
   
 0.999
B8CCG7_THAPS
Smc-like protein.
   
 0.937
THAPS_35499
Smc1.
   
 0.931
B8BRT7_THAPS
Smc-like protein.
   
 0.914
THAPS_7100
Predicted protein.
   
 0.856
B8LE83_THAPS
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.853
THAPS_23522
Predicted protein.
   
 
 0.785
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
Server load: low (22%) [HD]