STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BWZ5_THAPSUncharacterized protein. (2271 aa)    
Predicted Functional Partners:
trpAB
Tryptophane synthase.
  
  
 0.863
B8BPZ8_THAPS
Histidinol-phosphate aminotransferase.
  
  
 0.790
B8BUA9_THAPS
Probable phosphoribosyl-amp cyclohydrolase.
  
  
 0.790
B8C0Y0_THAPS
Imidazoleglycerol-phosphate dehydratase.
  
  
 0.790
B8C4E1_THAPS
ATP phosphoribosyltransferase.
  
  
 0.790
B8CDV9_THAPS
Uncharacterized protein; Belongs to the HisA/HisF family.
  
  
 0.790
hisH
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
  
  
 0.790
B8C3Y5_THAPS
Component II, glutamine amidotransferase.
  
  
 0.731
B8C9P1_THAPS
Indole-3-glycerol-phosphate synthase.
  
  
 0.731
B8C9P2_THAPS
IGPS domain-containing protein.
  
  
 0.731
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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