STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BXD3_THAPSUncharacterized protein. (451 aa)    
Predicted Functional Partners:
B8C677_THAPS
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.527
B8BXM4_THAPS
Brix domain-containing protein.
   
    0.493
B8CCQ0_THAPS
Sas10 domain-containing protein.
   
    0.493
B8C5B5_THAPS
NUC153 domain-containing protein.
   
    0.486
THAPS_15424
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
    0.471
B8C2N6_THAPS
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
    0.471
B8C0X5_THAPS
CBF domain-containing protein.
   
    0.467
B8BU98_THAPS
WD40-repeat protein.
   
    0.439
B8LDC4_THAPS
Predicted protein.
   
    0.418
B8C7P5_THAPS
Uncharacterized protein.
   
    0.412
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.