STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BXR2_THAPSUncharacterized protein. (692 aa)    
Predicted Functional Partners:
B8CDE4_THAPS
Chromatin assembly factor.
   
 0.763
H4_2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.742
B8CFY5_THAPS
Atp-dependent RNA helicase.
   
 0.660
B8CFY6_THAPS
Rna-helicase-like protein.
   
 0.658
B8BS24_THAPS
Histone H2A; Belongs to the histone H2A family.
   
 0.622
THAPS_35611
Histone H2B; Belongs to the histone H2B family.
   
 0.611
B8BX20_THAPS
Histone H2B; Belongs to the histone H2B family.
   
 0.611
B8CAJ4_THAPS
RuvB-like helicase; Belongs to the RuvB family.
   
 0.598
THAPS_19632
Predicted protein.
    
 0.594
B8BTB1_THAPS
CBFD_NFYB_HMF domain-containing protein.
    
 0.594
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.