STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BXR5_THAPSUncharacterized protein. (156 aa)    
Predicted Functional Partners:
B8CDE4_THAPS
Chromatin assembly factor.
   
 0.745
B8BUJ1_THAPS
Histone deacetylase 1 HDAC Hda1p.
   
 0.657
B8BW26_THAPS
Histone deactylase 1 HDAC Hda1p HDA1.
   
 0.656
B8C5S2_THAPS
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.656
B8C8P3_THAPS
Uncharacterized protein.
   
 
 0.637
B8CA53_THAPS
RNA-dependent RNA polymerase.
   
 
 0.627
B8BQ42_THAPS
MRG domain-containing protein.
    
 0.555
B8CBY5_THAPS
MRG domain-containing protein.
    
 0.555
MYB21
MYB DNA binding protein/ transcription factor-like protein.
   
 0.542
B8C3D4_THAPS
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
 
      0.531
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.