STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RL17RL17, ribosomal protein 17-like 60S large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family. (161 aa)    
Predicted Functional Partners:
RL5
RL5, ribosomal protein 5, 60S large ribosomal subunit.
  
 0.999
THAPS_269961
Predicted protein.
  
 0.999
RL3
RL3, ribosomal protein 3, 60S large ribosomal subunit; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
RL18
RL18, ribosomal protein 18, 60S large ribosomal subunit.
  
 0.999
RL21
RL21, ribosomal protein 21, 60S large ribosomal subunit.
   
 0.999
RL28
RL28, ribosomal protein 28 60S large ribosomal subunit.
   
 0.999
RL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
RL38
RL38, ribosomal protein 38 60S large ribosomal subunit; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
RL12
RL12, ribosomal protein 11 60S large ribosomal subunit; Belongs to the universal ribosomal protein uL11 family.
  
 0.999
RL14
RL14, ribosomal protein 14 60S large ribosomal subunit.
  
 0.999
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.