STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BY92_THAPSWLM domain-containing protein. (417 aa)    
Predicted Functional Partners:
B8BV06_THAPS
Uncharacterized protein.
   
 
 0.770
B8CFJ6_THAPS
Ubiquitin-like domain-containing protein.
   
 
 0.597
B8BZG8_THAPS
Ubiquitin-like domain-containing protein.
    
 
 0.596
B8CFM3_THAPS
Ubiquitin-like domain-containing protein.
    
 
 0.596
B8CC90_THAPS
Topoisom_I_N domain-containing protein.
   
 
 0.476
B8CC91_THAPS
TOPEUc domain-containing protein.
    
 
 0.475
B8LBL6_THAPS
Predicted protein.
   
 
 0.438
THAPS_15593
Predicted protein.
    
 
 0.424
DHC2
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 
 0.424
B8CFG9_THAPS
Uncharacterized protein.
   
 
 0.424
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.