STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BYD4_THAPSBRCT domain-containing protein. (1534 aa)    
Predicted Functional Partners:
B8LCV4_THAPS
Predicted protein; Belongs to the PI3/PI4-kinase family.
   
 0.781
B8BRT7_THAPS
Smc-like protein.
   
 
 0.714
B8BV51_THAPS
B30.2/SPRY domain-containing protein.
   
 0.682
B8C7G9_THAPS
Uncharacterized protein.
   
 0.659
B8C3H0_THAPS
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
    
 0.651
B8CAM3_THAPS
AAA_23 domain-containing protein.
   
 0.625
B8CFY6_THAPS
Rna-helicase-like protein.
   
 
 0.606
B8CFY5_THAPS
Atp-dependent RNA helicase.
   
 
 0.605
B8LDS8_THAPS
Predicted protein.
   
 0.595
THAPS_35407
Histone H2A; Belongs to the histone H2A family.
    
 0.594
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.