STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BYF3_THAPSUSP domain-containing protein. (341 aa)    
Predicted Functional Partners:
B8CCW8_THAPS
USP domain-containing protein; Belongs to the peptidase C19 family.
     
 
0.900
B8CC21_THAPS
PI3K/PI4K domain-containing protein.
   
 0.744
B8C1X3_THAPS
Protease of the insulinase family; Belongs to the peptidase M16 family.
 
 
    0.646
RPT6
26S proteasome ATPase regulatory subunit 6; Belongs to the AAA ATPase family.
    
 0.577
B8CDM0_THAPS
Uncharacterized protein.
 
 
    0.567
B8CAJ4_THAPS
RuvB-like helicase; Belongs to the RuvB family.
   
 
  0.561
B8C171_THAPS
FYVE-type domain-containing protein.
   
 0.548
B8CFN0_THAPS
GAF domain-containing protein.
   
 0.548
B8BRW9_THAPS
Uncharacterized protein.
 
 
    0.545
B8C3Y1_THAPS
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
 
 
  0.539
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.