STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BYR1_THAPSArginyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (602 aa)    
Predicted Functional Partners:
B8CA55_THAPS
tRNA-binding domain-containing protein.
  
 0.999
ITS1
Isoleucine-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.946
ITS3
Probable isoleucine-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.925
B8CBE9_THAPS
Glutamyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.923
ITS2
Isoleucine-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.907
B8BQK8_THAPS
tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.906
B8CBA7_THAPS
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 
0.905
B8BV30_THAPS
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.903
B8C444_THAPS
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.903
B8LCI1_THAPS
Prolyl-trna synthetase.
  
 0.901
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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