STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BZG0_THAPSCPSase. (1485 aa)    
Predicted Functional Partners:
THAPSDRAFT_997
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
 
 0.971
ASSY
ASSY.
 
 
 0.969
PYR
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
  
  0.959
GLNA
Glutamine synthetase.
  
 
 0.926
GLNN
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
  
 
 0.926
B8BVC6_THAPS
Glutamate dehydrogenase.
  
 0.916
GDH_2
Glutamate dehydrogenase.
  
 0.916
GDH_1
Glutmatae dehydrogenase, nadp-gdh; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.916
B8LBN1_THAPS
Diaminopimelate epimerase.
 
  
 0.909
NIR_2
Nitrite reductase-ferredoxin dependent.
   
 
 0.908
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.