STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C0F4_THAPSUncharacterized protein. (800 aa)    
Predicted Functional Partners:
B8C5W2_THAPS
Uncharacterized protein.
   
 
  0.549
B8CG69_THAPS
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
  0.546
RT4
RT4, ribosomal protein 4, mitochondrial large ribosomal subunit.
   
 
  0.544
B8BU98_THAPS
WD40-repeat protein.
   
 
  0.544
B8C4V0_THAPS
Uncharacterized protein.
   
 
  0.544
B8BS83_THAPS
Uncharacterized protein.
   
 
  0.543
THAPS_6835
Predicted protein.
   
 
  0.540
THAPS_7265
Predicted protein.
     
  0.540
THAPS_23337
Predicted protein.
     
  0.540
B8BSS5_THAPS
Uncharacterized protein.
     
  0.540
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.