STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C100_THAPSAllantoicase-like protein. (414 aa)    
Predicted Functional Partners:
URE
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
     
 0.910
B8C648_THAPS
Malate synthase; Belongs to the malate synthase family.
 
  
 0.703
B8C8U3_THAPS
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.667
B8BZA9_THAPS
Probable amp deaminase.
      
 0.624
B8C0K1_THAPS
Aliphatic amidase.
   
 
 0.615
ALD3
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.601
ALDO2
Fructose-bisphosphate aldolase.
   
  
 0.583
B8C8K0_THAPS
Sodium phosphate cotransporter.
      
 0.583
acnB
Aconitase hydratase 2.
      
 0.574
B8CEC0_THAPS
Uncharacterized protein.
   
 0.573
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.