STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C193_THAPSUncharacterized protein. (321 aa)    
Predicted Functional Partners:
B8BUA2_THAPS
NPL4 domain-containing protein.
   
 0.938
B8CC21_THAPS
PI3K/PI4K domain-containing protein.
   
 0.932
B8CEK1_THAPS
UBX domain-containing protein.
    
 0.928
B8C8E2_THAPS
UmuC domain-containing protein.
     
 0.903
B8LD83_THAPS
Predicted protein.
   
 
 0.838
B8BZP4_THAPS
Uncharacterized protein.
   
 
 0.831
B8C686_THAPS
U-box domain-containing protein.
    
 
 0.826
cdc48
Cell division cycle protein 48.
   
 0.792
cdc48-2
Cell division cycle protein 48.
   
 0.792
B8BPW0_THAPS
Uncharacterized protein.
    
 0.791
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.