STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C1B7_THAPSUSP domain-containing protein; Belongs to the peptidase C19 family. (546 aa)    
Predicted Functional Partners:
B8CC21_THAPS
PI3K/PI4K domain-containing protein.
   
 0.744
RPT6
26S proteasome ATPase regulatory subunit 6; Belongs to the AAA ATPase family.
    
 0.577
B8C171_THAPS
FYVE-type domain-containing protein.
   
 0.548
B8CFN0_THAPS
GAF domain-containing protein.
   
 0.548
B8C3Y1_THAPS
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.534
B8CEZ6_THAPS
RING-type domain-containing protein.
    
 0.530
B8BQ41_THAPS
Ubiquitin-like domain-containing protein.
    
 0.522
B8C272_THAPS
Ubiquitin-like domain-containing protein.
    
 0.522
B8LE52_THAPS
Copia-like retroelement pol polyprotein found-like protein.
   
 
 0.499
B8BXT6_THAPS
Uncharacterized protein.
    
 0.489
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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