STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C1H0_THAPSAP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)    
Predicted Functional Partners:
APB2
Beta subunit of clathrin adaptor complex AP2.
    
 0.902
APB1
AP complex subunit beta.
   
 0.902
THAPS_7044
Predicted protein.
    
 0.848
THAPS_596
Predicted protein.
    
 0.848
APG2
AP-1 complex subunit gamma.
   
 0.848
CHC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.771
B8CAY2_THAPS
Adaptin_N domain-containing protein.
   
 0.741
B8CBA1_THAPS
Alpha_adaptinC2 domain-containing protein.
    
 0.739
APA1
Alpha subunit of tetrameric clathrin adaptor complex AP1.
    
 0.739
APM1
Mu subunit of tetrameric clathrin adaptor complex AP1; Belongs to the adaptor complexes medium subunit family.
   
 0.737
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.