STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIT2Nitrilase. (320 aa)    
Predicted Functional Partners:
B8BUM0_THAPS
Uncharacterized protein.
 
      0.899
THAPSDRAFT_283
Bis(5'-adenosyl)-triphosphatase.
 
  
 0.749
B8CFQ2_THAPS
Spermine synthase; Belongs to the spermidine/spermine synthase family.
 
  
 0.684
B8CGC1_THAPS
Xanthine uracil permease.
  
  
 0.632
trpAB
Tryptophane synthase.
     
 0.626
THAPS_35561
Arginase; Belongs to the arginase family.
  
 0.620
PGD1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
  
 0.594
B8BZA9_THAPS
Probable amp deaminase.
      
 0.593
B8C0K1_THAPS
Aliphatic amidase.
      
 0.592
SIT2
Silicic acid transporter, silicon transport.
      
 0.590
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.