STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C2B9_THAPSABC transporter. (709 aa)    
Predicted Functional Partners:
B8CCV1_THAPS
Protein kinase domain-containing protein.
    
  0.904
B8CEC0_THAPS
Uncharacterized protein.
    
 0.821
B8C9N1_THAPS
Uncharacterized protein.
   
 0.736
B8BZW6_THAPS
Uncharacterized protein.
   
 0.698
THAPS_10886
Predicted protein.
   
 
 0.627
RecA_1
Predicted protein; Belongs to the RecA family.
   
 
 0.625
ALD3
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.581
B8CDL8_THAPS
Uncharacterized protein.
   
 
 0.545
B8LDU7_THAPS
Predicted protein.
   
 
 0.545
B8CCW1_THAPS
Peroxisomal biogenesis factor 6, peroxisomal assembly factor w, Paf2, pex6-like protein; Belongs to the AAA ATPase family.
     
 0.432
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.