STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C2I8_THAPSUncharacterized protein. (1609 aa)    
Predicted Functional Partners:
B8C076_THAPS
Uncharacterized protein.
    
 0.898
B8BV42_THAPS
CDC73_C domain-containing protein.
    
 0.593
B8CBV1_THAPS
Uncharacterized protein.
   
 0.591
apc10
Anaphase promoting complex subunit 10.
   
 0.583
B8C8S5_THAPS
Meiotic check point regulator-like protein.
    
 0.573
B8CET8_THAPS
ANAPC5 domain-containing protein.
    
 0.555
B8CBK3_THAPS
Anaphase promoting complex subunit.
    
 0.540
B8C5R7_THAPS
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.537
B8BR44_THAPS
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.521
B8BXV7_THAPS
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.521
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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