STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C313_THAPSNa_H_Exchanger domain-containing protein. (907 aa)    
Predicted Functional Partners:
B8BYR6_THAPS
Uncharacterized protein.
   
 0.710
B8C031_THAPS
Uncharacterized protein.
   
 0.710
P5CS
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.503
ARF5
ADP-ribosylation factor like protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.436
ARF1
Adp-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.433
ARF3
Adp-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 0.430
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.