STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C3A1_THAPSRmlD_sub_bind domain-containing protein. (316 aa)    
Predicted Functional Partners:
DGD3
Dtdp-glucose 4,6-dehydratase.
 
 
    0.900
THAPSDRAFT_780
UDP galactopyranose mutase.
  
  
 0.793
B8C9H5_THAPS
NAD(P)-bd_dom domain-containing protein.
 
  
 0.745
UGDH2
UDP-glucose 6-dehydrogenase.
  
  
 0.739
UGDH1
UDP-glucose 6-dehydrogenase.
  
  
 0.739
B8CCI3_THAPS
Uncharacterized protein.
  
  
 0.640
B8CFK7_THAPS
W2 domain-containing protein.
  
  
 0.640
B8CAF3_THAPS
NAD(P)-bd_dom domain-containing protein.
 
  
 0.606
B8CD60_THAPS
Glycosyltransferase.
  
  
 0.578
B8BWM8_THAPS
Udp-n-acetylglucosamin-dolichyl-phosphate: n-acetylglucosamin-phosphate transferase.
  
  
 0.532
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.