STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C3N1_THAPSSpindle pole body component. (676 aa)    
Predicted Functional Partners:
B8C4D5_THAPS
Spindle pole body component.
  
0.999
TUB4
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
  
 0.999
B8BQ06_THAPS
Uncharacterized protein.
   
 0.783
THAPS_7217
Predicted protein.
    
 
 0.669
TUB1
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.528
B8BQ22_THAPS
Uncharacterized protein; Belongs to the actin family.
    
   0.515
ACT4
Actin-related protein centractin-like protein; Belongs to the actin family.
    
   0.515
ACT5
Actin related protein centractin-like protein; Belongs to the actin family.
    
   0.515
ACT1
Actin-like protein.
    
   0.515
B8C7U7_THAPS
Uncharacterized protein.
   
 
 0.497
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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