STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C4Q2_THAPSCytochrome b5 heme-binding domain-containing protein. (869 aa)    
Predicted Functional Partners:
B8LBN3_THAPS
Predicted protein.
   
 
 0.908
B8BZ79_THAPS
Chitin synthetase.
  
 
 
0.901
B8C5T4_THAPS
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
 
    0.632
NRT1
Nitrate/nitrite transporter.
   
  
 0.598
NRT2
Nitrate/nitrite transporter.
   
  
 0.594
NRT3
Nitrate transporter.
      
 0.590
B8BR08_THAPS
Uncharacterized protein.
  
 
 0.588
trpAB
Tryptophane synthase.
     
 0.535
GFA_1
Glutamine-fructose-6-phosphate transaminase.
  
 
 0.503
GFA_2
Glutamine fructose 6 phosphate transaminase.
  
 
 0.503
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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