STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C4Y2_THAPSMethyltrans_SAM domain-containing protein. (194 aa)    
Predicted Functional Partners:
B8C0D4_THAPS
KH type-2 domain-containing protein.
   
 
 0.919
RS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.913
B8CDP0_THAPS
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 
 0.913
RS26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.910
B8CG46_THAPS
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.910
RL38
RL38, ribosomal protein 38 60S large ribosomal subunit; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.909
RS10
RS10, ribosomal protein 10 40S small ribosomal subunit.
   
 
 0.909
RS23
RS23, ribosomal protein 23 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.909
RSP1
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.908
RS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.908
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.