STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C595_THAPSSyntaxin-interacting protein unc-18; Belongs to the STXBP/unc-18/SEC1 family. (611 aa)    
Predicted Functional Partners:
B8BWQ6_THAPS
Syntaxin, epimorphin family; Belongs to the syntaxin family.
   
 0.999
B8CE99_THAPS
Uncharacterized protein.
   
 0.845
B8C878_THAPS
Exocyst subunit Exo70 family protein; Component of the exocyst complex.
    
 0.782
B8C6R4_THAPS
Uncharacterized protein.
   
 
  0.746
B8C187_THAPS
Uncharacterized protein.
   
 0.718
B8BR17_THAPS
Sec5 domain-containing protein.
    
 0.656
THAPS_35519
Predicted protein.
   
 
 0.642
TUB1
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.617
B8BVQ3_THAPS
Uncharacterized protein.
    
 0.598
B8BXC9_THAPS
4Fe-4S ferredoxin-type domain-containing protein.
    
 0.598
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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