STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C663_THAPSUncharacterized protein; Belongs to the TPP enzyme family. (818 aa)    
Predicted Functional Partners:
B8C486_THAPS
Uncharacterized protein; Belongs to the ketol-acid reductoisomerase family.
 
 
 0.948
B8BRI7_THAPS
Pyruvate carboxyltransferase domain-containing protein.
 
 
 0.945
B8BZN7_THAPS
Serine/threonine deaminase.
  
 0.937
B8C333_THAPS
PALP domain-containing protein.
  
 0.937
DAD1
Probable dihydroxyacid dehydratase.
  
 0.923
B8C732_THAPS
2-isopropylmalate synthase.
  
 
 0.908
MAO1
NAD dependent malic enzyme.
  
 
 0.893
PDHB1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.842
B8BVN3_THAPS
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.837
PYK1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.837
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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