STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C6V8_THAPSHomoserine dehydrogenase. (433 aa)    
Predicted Functional Partners:
B8C5L6_THAPS
Uncharacterized protein.
  
 0.915
ASDH
Aspartate-semialdehyde dehydrogenase.
  
 0.855
B8C772_THAPS
AA_kinase domain-containing protein.
 
 
 0.846
B8BRC6_THAPS
Threonine synthase.
  
 
 0.727
B8CBR8_THAPS
Threonine synthase.
  
 
 0.727
P5CS
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.714
B8C6J0_THAPS
Aldolase_II domain-containing protein.
  
  
 0.650
B8C3Y5_THAPS
Component II, glutamine amidotransferase.
  
  
 0.614
B8C9P1_THAPS
Indole-3-glycerol-phosphate synthase.
     
 0.610
B8C9P2_THAPS
IGPS domain-containing protein.
     
 0.610
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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