STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C8N4_THAPSFH2 domain-containing protein. (180 aa)    
Predicted Functional Partners:
B8CCV1_THAPS
Protein kinase domain-containing protein.
   
 0.926
B8BQ22_THAPS
Uncharacterized protein; Belongs to the actin family.
   
 0.674
ACT4
Actin-related protein centractin-like protein; Belongs to the actin family.
   
 0.674
ACT5
Actin related protein centractin-like protein; Belongs to the actin family.
   
 0.674
ACT1
Actin-like protein.
   
 0.674
B8C1L3_THAPS
C2-C2_1 domain-containing protein.
    
 0.643
B8BSM4_THAPS
Uncharacterized protein.
   
 0.551
ACT2
Actin like protein; Belongs to the actin family.
   
 0.549
THAPS_35519
Predicted protein.
   
 0.535
THAPS_23528
Rab-type small GTPase.
   
 0.535
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.