STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C9I3_THAPSUncharacterized protein. (194 aa)    
Predicted Functional Partners:
B8BU23_THAPS
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
  
 0.999
B8LEI0_THAPS
Predicted protein.
  
 0.960
B8BS55_THAPS
V-type h-atpase subunit; Belongs to the V-ATPase proteolipid subunit family.
 
 
    0.561
B8C029_THAPS
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
   
  
 0.550
B8BUJ2_THAPS
Uncharacterized protein.
   
 
 0.537
B8BV37_THAPS
Uncharacterized protein.
 
 
    0.519
B8LBV3_THAPS
Kinase; Belongs to the inositol phosphokinase (IPK) family.
   
  
 0.482
B8CE85_THAPS
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
   
 
 0.443
B8LBT6_THAPS
Predicted protein.
   
 
 0.442
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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