STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C9S8_THAPSPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (169 aa)    
Predicted Functional Partners:
B8BYE2_THAPS
Uncharacterized protein.
   
 0.962
B8CAX3_THAPS
RanGAP, ran-binding protein 1-like protein.
 
 
 0.895
THAPS_264492
Predicted protein; Belongs to the peptidase C1 family.
   
 
 0.835
B8C5P5_THAPS
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.632
B8BRK1_THAPS
SKIP_SNW domain-containing protein.
    
 0.621
B8BT32_THAPS
Uncharacterized protein.
   
 0.618
B8CGF0_THAPS
WD_REPEATS_REGION domain-containing protein.
    
 0.614
B8C032_THAPS
Uncharacterized protein.
    
 0.611
THAPSDRAFT_669
Ran small GTPase.
   
 0.610
B8BU31_THAPS
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.606
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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