STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CA07_THAPSCbiX domain-containing protein. (378 aa)    
Predicted Functional Partners:
B8C0W2_THAPS
TP_methylase domain-containing protein; Belongs to the precorrin methyltransferase family.
  
  
 0.608
cobA
Uroporphyrin-iii C-methyltransferase.
  
  
 0.608
trpAB
Tryptophane synthase.
  
  
 0.585
B8C0R5_THAPS
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
  
  
 0.536
B8BPZ8_THAPS
Histidinol-phosphate aminotransferase.
     
 0.517
B8BTQ9_THAPS
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
  
  
 0.475
B8BW28_THAPS
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
      
 0.471
B8BS05_THAPS
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.444
B8C8P7_THAPS
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
  
  
 0.443
B8CCL3_THAPS
Phosphoadenosine-phosphosulphate reductase.
  
  
 0.440
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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