STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CAI8_THAPSUncharacterized protein. (592 aa)    
Predicted Functional Partners:
B8BW28_THAPS
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
      0.734
B8BSI1_THAPS
M20_dimer domain-containing protein.
   
 
 0.449
B8CC20_THAPS
Hflx-type G domain-containing protein.
  
  
 0.444
B8C3Y5_THAPS
Component II, glutamine amidotransferase.
  
 
 0.413
B8C9P1_THAPS
Indole-3-glycerol-phosphate synthase.
  
 
 0.413
B8C9P2_THAPS
IGPS domain-containing protein.
  
 
 0.413
B8C183_THAPS
Aminoacylase 1.
   
 
 0.401
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.