STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CCI0_THAPSUncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family. (59 aa)    
Predicted Functional Partners:
rps19
30S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
 
  0.544
rps9
30S ribosomal protein S9, chloroplastic.
   
 
  0.543
rps2
30S ribosomal protein S2, chloroplastic.
     
  0.540
rps18
30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family.
   
 
  0.540
rps11
30S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family.
   
 
  0.540
B8BQR2_THAPS
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
  0.540
RT5
RT5, ribosomal protein 5; Belongs to the universal ribosomal protein uS5 family.
     
  0.540
B8BUX3_THAPS
MRP-S28 domain-containing protein.
   
 
  0.540
B8BWH3_THAPS
Uncharacterized protein.
     
  0.540
B8C266_THAPS
Uncharacterized protein.
   
 
  0.540
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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