STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CCP6_THAPStRNA-methyltransferase. (392 aa)    
Predicted Functional Partners:
B8BU46_THAPS
GIDA_assoc domain-containing protein.
  
 
 0.485
B8C7U0_THAPS
NifU like N terminal domain, iron; Belongs to the NifU family.
  
  
 0.459
B8C1H9_THAPS
Serine/threonine-protein kinase PLK.
   
  0.457
B8C0R1_THAPS
Uncharacterized protein.
  
  
 0.425
ADL
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.414
MTF1
Methionyl-trna formyltransferase.
  
  
 0.413
B8C6K0_THAPS
SpoU_methylase domain-containing protein.
  
  
 0.400
B8C9J1_THAPS
PseudoU_synth_2 domain-containing protein.
     
 0.400
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.