STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CD60_THAPSGlycosyltransferase. (549 aa)    
Predicted Functional Partners:
B8C606_THAPS
Uncharacterized protein.
   
 0.957
THAPS_263193
Glycos_transf_1 domain-containing protein.
   
0.929
B8C6I2_THAPS
Uncharacterized protein.
   
 0.840
B8CFY5_THAPS
Atp-dependent RNA helicase.
   
 0.662
B8CFY6_THAPS
Rna-helicase-like protein.
   
 0.662
B8C4A1_THAPS
Uncharacterized protein.
    
 0.642
THAPSDRAFT_780
UDP galactopyranose mutase.
  
  
 0.622
B8CE33_THAPS
Uncharacterized protein.
   
 
 0.592
B8BWM8_THAPS
Udp-n-acetylglucosamin-dolichyl-phosphate: n-acetylglucosamin-phosphate transferase.
  
  
 0.583
THAPSDRAFT_972
Glyco_tran_28_C domain-containing protein.
     
 0.578
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.