STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CDF1_THAPSUrea transporter. (318 aa)    
Predicted Functional Partners:
AMT2
Ammonium transporter.
     
 0.666
AMT6
Ammonium transporter.
     
 0.666
AMT4
Ammonium transporter.
     
 0.663
B8C0Q0_THAPS
Ammonium transporter.
     
 0.663
AMT3
Ammonium transporter.
     
 0.663
B8C816_THAPS
Ammonium transporter.
     
 0.663
NRT1
Nitrate/nitrite transporter.
   
  
 0.600
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
      
 0.591
NRT2
Nitrate/nitrite transporter.
   
  
 0.591
NRT3
Nitrate transporter.
      
 0.591
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.