STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CDU2_THAPSAldedh domain-containing protein. (612 aa)    
Predicted Functional Partners:
P5CS
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.597
THAPS_17039
Predicted protein.
   
 
 0.534
B8BYT6_THAPS
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 
 0.503
B8CAF1_THAPS
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.503
B8C648_THAPS
Malate synthase; Belongs to the malate synthase family.
   
  
 0.496
B8CCT5_THAPS
Fe-ADH domain-containing protein.
   
 
 0.486
B8LDQ6_THAPS
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.479
B8C9I8_THAPS
Uncharacterized protein.
   
 
 0.458
ACD3
Probable acyl-coa dehydrogenase, short/branched chain specific.
   
 
 0.450
B8C8C2_THAPS
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
  
 0.430
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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