STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CDY1_THAPSCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (658 aa)    
Predicted Functional Partners:
B8BTK4_THAPS
Autophagy-related protein.
   
 0.999
B8C5Z4_THAPS
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.993
THAPS_35360
Autophagy-related protein 3.
   
 
 0.789
B8BZ94_THAPS
Ubiquitin activating enzyme e1-like protein.
   
 
 0.654
B8CDZ0_THAPS
ATG13 domain-containing protein.
   
 
 0.632
B8BXK1_THAPS
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
  
 0.614
B8C4Q5_THAPS
Ubiquitin-like protein ATG12.
   
 
 0.604
B8C175_THAPS
WD40-repeat protein.
   
  
 0.576
B8C043_THAPS
ATG2_CAD domain-containing protein.
   
  
 0.561
B8BVC8_THAPS
Uncharacterized protein.
   
 
 0.557
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
Server load: low (22%) [HD]