STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CE28_THAPSRRM domain-containing protein. (835 aa)    
Predicted Functional Partners:
B8BYT2_THAPS
Uncharacterized protein.
   
 
 0.754
B8BVT5_THAPS
RRM domain-containing protein.
   
 0.705
THAPS_35274
Predicted protein.
    
 0.562
B8BRF6_THAPS
Suf domain-containing protein.
   
 
 0.527
THAPS_263124
U1 small nuclear ribonucleoprotein, U1sRNP protein.
   
 0.443
B8CA43_THAPS
Uncharacterized protein.
   
 0.435
B8BVQ7_THAPS
Uncharacterized protein.
   
 0.433
B8CF74_THAPS
Predicted protein.
     
 0.420
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.