STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CEF0_THAPSENDO3c domain-containing protein. (472 aa)    
Predicted Functional Partners:
B8CDE4_THAPS
Chromatin assembly factor.
    
 0.881
B8BUJ1_THAPS
Histone deacetylase 1 HDAC Hda1p.
   
 0.750
B8BW26_THAPS
Histone deactylase 1 HDAC Hda1p HDA1.
    
 0.748
B8C5S2_THAPS
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.748
B8BTM4_THAPS
Uncharacterized protein.
    
 0.569
B8C1K1_THAPS
Sterol delta7 reductase-like protein.
    
 0.569
B8BQN3_THAPS
Hist_deacetyl domain-containing protein.
   
 0.545
B8BX74_THAPS
Hist_deacetyl domain-containing protein.
    
 0.545
B8C1J3_THAPS
Histone deacetylase 1 HDAC Hda1p.
    
 0.545
B8C5L2_THAPS
Histone deacetylase.
    
 0.545
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.