STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CEN6_THAPSNuclear distribution protein. (334 aa)    
Predicted Functional Partners:
B8C7T8_THAPS
Platelet-activating factor acetylhydrolase beta subunit-like protein.
   
 0.756
B8C1H9_THAPS
Serine/threonine-protein kinase PLK.
    
 0.628
B8C880_THAPS
CLASP_N domain-containing protein.
     
 0.614
B8BQI5_THAPS
Uncharacterized protein.
    
  0.586
RS27
RS27, ribosomal protein 27 40S small ribosomal subunit.
   
 
 0.578
B8C117_THAPS
Uncharacterized protein.
   
 
  0.572
B8CD20_THAPS
Uncharacterized protein.
   
 
  0.570
THAPS_38153
Predicted protein.
   
 
  0.546
rpl23-2
Protein 23 of the large ribosomal subunit; Belongs to the universal ribosomal protein uL14 family.
 
 
   0.544
B8BRZ8_THAPS
PH domain-containing protein.
     
 0.454
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.