STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CF20_THAPSGPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (261 aa)    
Predicted Functional Partners:
B8LEX5_THAPS
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
  
 
0.959
RP3A
RP3A,-like protein to dna-directed RNA polymerase II third largest subunit.
   
 
 0.846
B8CCH8_THAPS
Dna-directed RNA polymerase I 40kDa polypeptide, rpo1-1-like protein.
   
 
 0.764
B8C402_THAPS
DNA directed RNA polymerase II subunit, 8.2kDa, rpb10-like protein.
    
 
 0.759
B8C3F5_THAPS
Dna-directed RNA polymerase i.
   
 
 0.747
RPB5
RPB5,-like protein to RNA polymerase i.
   
 
 0.734
B8CC64_THAPS
Uncharacterized protein.
    
 
 0.718
B8C8G2_THAPS
Small RNA polymerase.
   
 
 0.704
RPC2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.693
B8C460_THAPS
19kDa subunit of RNA polymerase.
    
 
 0.646
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.