STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CGF0_THAPSWD_REPEATS_REGION domain-containing protein. (591 aa)    
Predicted Functional Partners:
THAPS_6727
Predicted protein.
   
 0.999
B8BTN4_THAPS
Uncharacterized protein.
   
 0.999
B8BUP9_THAPS
WD_REPEATS_REGION domain-containing protein.
  
 0.999
B8C032_THAPS
Uncharacterized protein.
   
 0.999
B8C1M1_THAPS
Uncharacterized protein.
   
 0.999
B8BTD5_THAPS
Uncharacterized protein.
    
 0.998
B8C1Q6_THAPS
Uncharacterized protein.
   
 0.996
B8BS09_THAPS
U5 small nuclear ribonucleoprotein, U5 snRNP.
   
 
 0.995
B8C0X9_THAPS
Pre-mrna splicing factor splicing factor hprp17-like protein.
  
 
 0.995
B8C5K6_THAPS
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.995
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.